getplots: Get a list of dimension-plots
In saisomesh2594/funcutils: Utility Functions
Description
Usage
Arguments
Value
Description
This function returns a list of 3 dimension plots for your single cell data.
The first plot is a basic DimPlot output
The second plot is a DimPlot with cells.highlighted with the cells provided
The third plot is a DimPlot with cells.highlighted with the cells provided
Usage
1
getplots(sro, sr, dd, plt.title)
Arguments
sro
A Seurat Object
sr
A vector of cell barcodes to highlight. These are the barcodes predicted to be doublets by Scrublet
dd
A vector of cell barcodes to highlight. These are the barcodes predicted to be doublets by DoubletDecon
plt.title
A title for the plots
Value
A list of three plots
saisomesh2594/funcutils documentation built on Sept. 2, 2020, 12:39 p.m.
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Description Usage Arguments Value
Description
This function returns a list of 3 dimension plots for your single cell data. The first plot is a basic DimPlot output The second plot is a DimPlot with cells.highlighted with the cells provided The third plot is a DimPlot with cells.highlighted with the cells provided
Usage
1 | getplots(sro, sr, dd, plt.title)
|
Arguments
sro |
A Seurat Object |
sr |
A vector of cell barcodes to highlight. These are the barcodes predicted to be doublets by Scrublet |
dd |
A vector of cell barcodes to highlight. These are the barcodes predicted to be doublets by DoubletDecon |
plt.title |
A title for the plots |
Value
A list of three plots
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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