Man pages for sales-lab/spatialDE
R wrapper for SpatialDE
| dot-importPyModule | Import SpatialDE |
| FSV_sig | Plot Fraction Spatial Variance vs Q-value |
| MOB_sample_info | Mouse Olfactory Bulb sample metadata |
| mockSVG | Generate count matrix for spatially variable genes. |
| model_search | Compare model fits with different models |
| modelSearch | Classify Spatially Variable Genes to interpretable fitting... |
| multiGenePlots | Plot Spatial Patterns of Multiple Genes |
| regress_out | Regress out library size effect |
| Rep11_MOB_0 | Mouse Olfactory Bulb spatial gene expression data |
| run | Perform SpatialDE test |
| spatialDE | Find spatially variable genes with *SpatialDE* |
| spatial_patterns | Group spatially variable genes into spatial patterns using... |
| spatialPatterns | Automatic expression histology in *SpatialDE* |
| stabilize | Stabilize variance of counts |
