Files in samWieczorek/Prostar2

PKG_TITLE

DESCRIPTION

Meta/vignette.rds

NAMESPACE

NEWS.md

Prostar2.Rproj

R/DataManager/mod_build_design.R.old

R/DataManager/mod_build_design_example.R.old

R/DataManager/mod_choose_pipeline.R

R/DataManager/mod_convert_ms_file.R.old

R/DataManager/mod_import_file_from.R.old

R/DataManager/mod_mod_select_keyID_from_MSnset.R.old

R/DataManager/mod_open_dataset.R.old

R/DataManager/mod_open_demo_dataset.R

R/DataManager/mod_select_keyID.R.old

R/DataManager/mod_select_keyID_from_MSnset.R.old

R/Drafts/example_resizeModal.R R/Drafts/test-modal_dragg-resizable.R R/Drafts/test_button_absPanel.R R/app_config.R R/app_server.R R/app_ui.R R/global.R R/golem_utils_server.R R/mod_bsmodal.R R/mod_bug_report.R R/mod_change_assay.R R/mod_check_updates.R R/mod_det_quant_impute_Values.R R/mod_format_DT.R R/mod_homepage.R R/mod_infos_dataset.R R/mod_insert_md.R R/mod_loading_page.R R/mod_navbar_menu.R R/mod_observe_dynamic_colourPicker_input.R R/mod_popover_for_help.R R/mod_release_notes.R R/mod_settings.R R/run_app.R R/theme.R R/utils_Prostar.R

README

README.MD

TODO-list.txt

_pkgdown.yml

dev/01_start.R dev/02_dev.R dev/03_deploy.R dev/Customize theme/create_customized_theme.R dev/Customize theme/demo_vignette_theme_fresh.R dev/check_module_process/copy_paste_simple_test.R dev/check_module_process/copy_paste_test_wParam.R dev/check_module_process/form_new_module.R dev/check_module_process/mod_pipe_protein_Filtering_manuel.R dev/check_module_process/module_chunks_in_variables.R dev/check_module_process/test/temp_mod_pipe_protein_newModule_shinyTest.R dev/check_module_process/test_mod_pipe_protein_Filtering.R dev/check_module_process/watch_pipe_protein_newModule_shinyTest.R dev/prostar_NvCSS/app_test_css.R dev/prostar_NvCSS/app_test_dashboard.R dev/prostar_NvCSS/app_v_timeline_open_modal.R

dev/prostar_NvCSS/tl_style_css.odp

dev/prostar_NvCSS/www/fleche.png

dev/prostar_NvCSS/www/index.html

dev/prostar_NvCSS/www/logo.png

dev/prostar_NvCSS/www/part1.html

dev/prostar_NvCSS/www/part2.html

dev/prostar_NvCSS/www/style.css

dev/prostar_NvCSS/www/style0.css

dev/prostar_NvCSS/www/style_tl1.css

dev/prostar_NvCSS/www/style_tl2.css

dev/prostar_NvCSS/www/style_tl3.css

dev/prostar_NvCSS/www/style_tl4.css

dev/prostar_NvCSS/www/style_tl5.css

dev/prostar_NvCSS/www/style_tl6.css

dev/prostar_NvCSS/www/timeline_h.PNG

dev/prostar_NvCSS/www/timeline_v.PNG

dev/run_dev.R dev/test_dev/DataManager/test-mod_build_design.R dev/test_dev/DataManager/test-mod_build_design_example.R dev/test_dev/DataManager/test-mod_choose_pipeline.R dev/test_dev/DataManager/test-mod_convert_ms_file.R dev/test_dev/DataManager/test-mod_open_dataset.R dev/test_dev/DataManager/test-mod_open_demo_dataset.R dev/test_dev/UI_for_func_params/mod_norm_QuantileCentering_UI.R dev/test_dev/UI_for_func_params/mod_norm_loess_UI.R dev/test_dev/UI_for_func_params/mod_norm_vsn_UI.R dev/test_dev/UI_for_func_params/test-params-for-methodsUI-in-pipeline.R dev/test_dev/__modules_new_syntax.R dev/test_dev/check_module_process.R dev/test_dev/gargoyle-example.R dev/test_dev/js_actions_buttons_example.R dev/test_dev/module_pipeline_process_skeleton.R dev/test_dev/modules_graph.R dev/test_dev/observe_dynamically_created_inputs.R dev/test_dev/progressBar/apps_web_search.R dev/test_dev/progressBar/learn_reactiveFileReaderApp.R dev/test_dev/progressBar/learn_reactiveFileReaderCalcul.R dev/test_dev/progressBar/mini-test.R dev/test_dev/progressBar/withProgress_App.R dev/test_dev/progressBar/withProgress_Calcul.R

dev/test_dev/shiny_bookmarks/1a185984d37ed0f7/input.rds

dev/test_dev/shiny_bookmarks/1a185984d37ed0f7/message.txt

dev/test_dev/shiny_bookmarks/30f0a0721ce741a4/input.rds

dev/test_dev/shiny_bookmarks/30f0a0721ce741a4/message.txt

dev/test_dev/shiny_bookmarks/37a5f6638b2cacd8/input.rds

dev/test_dev/shiny_bookmarks/37a5f6638b2cacd8/message.txt

dev/test_dev/shiny_bookmarks/38c191e658022322/input.rds

dev/test_dev/shiny_bookmarks/3f3bfa9febf6825f/input.rds

dev/test_dev/shiny_bookmarks/3f3bfa9febf6825f/message.txt

dev/test_dev/shiny_bookmarks/965d463a332f880b/input.rds

dev/test_dev/shiny_bookmarks/965d463a332f880b/message.txt

dev/test_dev/shiny_bookmarks/d24ce8c2396f777c/input.rds

dev/test_dev/shiny_bookmarks/d24ce8c2396f777c/message.txt

dev/test_dev/test-InOut-process-module.R dev/test_dev/test-inlineCSS_for_nav_module.R dev/test_dev/test-mod_bug_report.R dev/test_dev/test-mod_check-updates.R dev/test_dev/test-mod_filtering_protein.R dev/test_dev/test-mod_format_DT.R dev/test_dev/test-mod_homepage.R dev/test_dev/test-mod_import_file_from.R dev/test_dev/test-mod_infos_dataset.R dev/test_dev/test-mod_insert_md.R dev/test_dev/test-mod_loading_page.R dev/test_dev/test-mod_navbar_menu.R dev/test_dev/test-mod_navigation_for_WF.R dev/test_dev/test-mod_plots_cc.R dev/test_dev/test-mod_popover_for_help.R dev/test_dev/test-mod_release_notes.R dev/test_dev/test-mod_select_keyID.R dev/test_dev/test-mod_select_keyID_from_MSnset.R dev/test_dev/test-mod_settings.R dev/test_dev/test-nested_mod_navigation.R dev/test_dev/test-params-between-modules.R dev/test_dev/test-passing-parameters-through-n-modules.R dev/test_dev/test-return_R6.R dev/test_dev/test-return_module.R dev/test_dev/test-selectInput-Event.R dev/test_dev/test-session-between-modules.R dev/test_dev/test-session_userData.R dev/test_dev/test-shinyjs.R dev/test_dev/test_bookmarking.R dev/test_dev/test_bootstraplib_theme.R dev/test_dev/test_colourPicker_in_module.R dev/test_dev/test_confirm_modal.R dev/test_dev/test_create_theme.R dev/test_dev/test_disable_items_in_selectInput.R dev/test_dev/test_hot.R dev/test_dev/test_image_in_actionButton.R dev/test_dev/test_mod_bsmodal.R dev/test_dev/test_mod_change_assay.R dev/test_dev/test_mod_det_quant_impute_Values.R dev/test_dev/test_mod_settings_with_module.R dev/test_dev/test_modal_in_module.R dev/test_dev/test_navbar_with_modules.R dev/test_dev/test_reactivity_modules_plots.R dev/test_dev/test_remove_module.R dev/test_dev/test_remove_module_2.R dev/test_dev/test_remove_module_3.R dev/test_dev/test_retour_multiples_modules.R dev/test_dev/test_selectInput.R dev/test_dev/test_shinyjs_in_module_separated.R dev/test_dev/test_toto.R dev/test_dev/test_widget_icon.R doc/Build-a-pipeline-module.R doc/Build-a-pipeline-module.Rmd

doc/Build-a-pipeline-module.html

doc/Prostar2.R doc/Prostar2.Rmd

doc/Prostar2.html

inst/app/www/LogoProstarComplet.png

inst/app/www/css/README.html

inst/app/www/css/README.md

inst/app/www/css/_variables-Prostar.scss

inst/app/www/css/_variables-cerulean.scss

inst/app/www/css/arrow.css

inst/app/www/css/custom_sass.css

inst/app/www/css/image.css

inst/app/www/css/legend.css

inst/app/www/css/loading_page.css

inst/app/www/css/prostar.css

inst/app/www/css/sass-size.scss

inst/app/www/desc_quantiData.png

inst/app/www/favicon.ico

inst/app/www/google-analytics.js

inst/app/www/image.css

inst/app/www/images/LogoProstarComplet.png

inst/app/www/images/Ok.png

inst/app/www/images/Problem.png

inst/app/www/images/Rlogo.svg

inst/app/www/images/Sam.png

inst/app/www/images/Thomas-Burger-155.jpg

inst/app/www/images/ajax-loader.gif

inst/app/www/images/cover.jpg

inst/app/www/images/dfPriorIssue.png

inst/app/www/images/edyp.png

inst/app/www/images/logo_bioconductor.gif

inst/app/www/images/vignettes/desc_corrmatrix.png

inst/app/www/images/vignettes/desc_density.png

inst/app/www/images/vignettes/desc_group_mv.png

inst/app/www/images/vignettes/desc_heatmap.png

inst/app/www/images/vignettes/desc_intdistrib.png

inst/app/www/images/vignettes/desc_pca.png

inst/app/www/images/vignettes/desc_quantiData.png

inst/app/www/images/vignettes/desc_varDist.jpg

inst/app/www/images/vignettes/desc_violinplot.png

inst/app/www/prostar.css

inst/app/www/script.js

inst/extdata/config.yml

inst/golem-config.yml

logo.png

man/mod_bug_report.Rd man/mod_check_updates.Rd man/mod_format_DT.Rd man/mod_homepage.Rd man/mod_infos_dataset.Rd man/mod_insert_md.Rd man/mod_loading_page.Rd man/mod_navbar_menu.Rd man/mod_popover_for_help.Rd man/mod_release_notes.Rd man/mod_settings.Rd man/run_app.Rd

pkgdown/favicon/apple-touch-icon-120x120.png

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pkgdown/favicon/favicon-32x32.png

pkgdown/favicon/favicon.ico

shiny_bookmarks/9a82cb0b022f26af/input.rds

tests/testthat.R tests/testthat/test-app.R tests/testthat/test-golem-recommended.R

vignettes/.gitignore

vignettes/.~lock.schema tl_engine.pptx#

vignettes/Build-a-pipeline-module.Rmd vignettes/Create-a-new-pipeline-tutorial.Rmd vignettes/Prostar2.Rmd vignettes/Prostar_dev_guideline.Rmd vignettes/Prostar_workflow_tutorial.Rmd vignettes/Prostar_workflow_userguide.Rmd

vignettes/figs/GO_tab1.png

vignettes/figs/GO_tab2.png

vignettes/figs/GO_tab3.png

vignettes/figs/GO_tab4.png

vignettes/figs/aggregation.png

vignettes/figs/anadiffsum.png

vignettes/figs/convert_convert.png

vignettes/figs/convert_dataID.png

vignettes/figs/convert_exp_featdata.png

vignettes/figs/convert_sampledata.png

vignettes/figs/convert_selectfile.png

vignettes/figs/cp4p-choice.png

vignettes/figs/cp4p-default.png

vignettes/figs/cp4p-ideal.png

vignettes/figs/cp4p-pb1.png

vignettes/figs/cp4p-pb2.png

vignettes/figs/desc_CVDist_ZoomIn.png

vignettes/figs/desc_CVDist_ZoomOut.png

vignettes/figs/desc_PCA.png

vignettes/figs/desc_corrmatrix.png

vignettes/figs/desc_fdata.png

vignettes/figs/desc_heatmap.png

vignettes/figs/desc_intdistrib.png

vignettes/figs/desc_missValues.png

vignettes/figs/desc_pdata.png

vignettes/figs/desc_quantiData.png

vignettes/figs/descstat-overview.png

vignettes/figs/equiv-non-fig.txt

vignettes/figs/export.png

vignettes/figs/fdr-thresh.png

vignettes/figs/filter1.png

vignettes/figs/filter2.png

vignettes/figs/filter3.png

vignettes/figs/home.png

vignettes/figs/hp.png

vignettes/figs/load-pep.png

vignettes/figs/load-prot.png

vignettes/figs/normalisation.png

vignettes/figs/peptide-basicImputation.png

vignettes/figs/peptide-imp4p.png

vignettes/figs/protein-MEC.png

vignettes/figs/protein-POV.png

vignettes/figs/pushpval.png

vignettes/schema tl_engine.pptx

samWieczorek/Prostar2 documentation built on Jan. 18, 2021, 11:42 p.m.