sanjaysinghrathi/PatternCount: PatternCount is a package to count the number of times a 'Pattern' occurs in a 'Text'.

PatternCount is a package to count the number of times a 'Pattern' occurs in a 'Text'. It is originally developed for use in genomics to identify the number of times a k-mer ('Pattern') appears in a length of DNA sequence ('Text'). However, it can be apply to any character vectors.

Getting started

Package details

AuthorSheah Lin Lee and Sanjay Rathee
MaintainerSanjay Rathee <sanjay.rathee@oncology.ox.ac.uk>
LicenseGPL
Version0.1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("sanjaysinghrathi/PatternCount")
sanjaysinghrathi/PatternCount documentation built on July 12, 2020, 12:07 a.m.