benchmarkSim_batch: General function to run the statistical test abstracting much...
In satabdisaha1288/scBT: What the Package Does (One Line, Title Case)
benchmarkSim_batch R Documentation
General function to run the statistical test abstracting much of the individual steps
Description
General function to run the statistical test abstracting much of the individual steps
Usage
benchmarkSim_batch(sim, test, fc.threshold = 0, pct.expressed = 0)
Arguments
sce
SingleCellExperiment object with a logcounts assay
and Dose column in the cell metadata
method
the statistical test(s) to run on the sce object. Can be any of the following: Bayes, LRT.linear, LRT.multiple, ANOVA, KW, WRS, MAST, ChiSQ
Value
a vector of p values from the ANOVA test
satabdisaha1288/scBT documentation built on June 1, 2025, 4:06 p.m.
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| benchmarkSim_batch | R Documentation |
General function to run the statistical test abstracting much of the individual steps
Description
General function to run the statistical test abstracting much of the individual steps
Usage
benchmarkSim_batch(sim, test, fc.threshold = 0, pct.expressed = 0)
Arguments
sce |
SingleCellExperiment object with a logcounts assay and Dose column in the cell metadata |
method |
the statistical test(s) to run on the sce object. Can be any of the following: Bayes, LRT.linear, LRT.multiple, ANOVA, KW, WRS, MAST, ChiSQ |
Value
a vector of p values from the ANOVA test
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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