LoadReference: Load the reference RDS files

In satijalab/seurat-data: Install and Manage Seurat Datasets

Load the reference RDS files

Description

Read in a reference Seurat object and annoy index. This function can read from a file path. In order to read properly, there must be the following files:

• “ref.Rds” for the downsampled reference Seurat object (for mapping)

• “idx.annoy” for the nearest-neighbor index object

Usage

LoadReference(path)

Arguments

path	Pathto the two RDS files

Value

A list with two entries:

map

The downsampled reference Seurat object (for mapping)

plot

The reference Seurat object (for plotting)

satijalab/seurat-data documentation built on April 12, 2025, 7:45 p.m.