TMHMM: Set of 160 Membrane Proteins Used as a Cross-Validation Set
In schifferl/TMHMM: Transmembrane Helix Prediction

Description Usage Format Source

Set of 160 Membrane Proteins Used as a Cross-Validation Set

TMHMM

A 'data.frame' with 160 rows and 6 variables:

PROTEIN: the Swiss-Prot identifier
SEQUENCE: the amino acid sequence
TOPOLOGY: the true topology sequence (I = inside, M = membrane, O = outside)
PARTITION: the cross-validation partition
PREDICTION: the predicted topology sequence (I = inside, M = membrane, O = outside)
VALIDATION: the validated topology sequence (I = inside, M = membrane, O = outside)

http://www.cbs.dtu.dk/~krogh/TMHMM/data/set160.0.labels

http://www.cbs.dtu.dk/~krogh/TMHMM/data/set160.1.labels

http://www.cbs.dtu.dk/~krogh/TMHMM/data/set160.2.labels

http://www.cbs.dtu.dk/~krogh/TMHMM/data/set160.3.labels

http://www.cbs.dtu.dk/~krogh/TMHMM/data/set160.4.labels

http://www.cbs.dtu.dk/~krogh/TMHMM/data/set160.5.labels

http://www.cbs.dtu.dk/~krogh/TMHMM/data/set160.6.labels

http://www.cbs.dtu.dk/~krogh/TMHMM/data/set160.7.labels

http://www.cbs.dtu.dk/~krogh/TMHMM/data/set160.8.labels

http://www.cbs.dtu.dk/~krogh/TMHMM/data/set160.9.labels

http://www.cbs.dtu.dk/~krogh/TMHMM/160.predictions

schifferl/TMHMM documentation built on Dec. 16, 2019, 12:46 a.m.

schifferl/TMHMM index

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