tuberculosis: find/get tuberculosis gene expression data

In schifferl/tuberculosis: Tuberculosis Gene Expression Data for Machine Learning

find/get tuberculosis gene expression data

Description

To find or get tuberculosis gene expression data, users will use the tuberculosis function. The dryrun argument allows users to test a query prior to returning resources. When dryrun = TRUE, the function will print the names of matching resources as a message and return them invisibly as a character vector. When dryrun = FALSE, the function will either download resources from ExperimentHub or load them from the user’s local cache. If a resource has multiple creation dates, the most recent is selected by default; add a date to override this behavior.

Usage

tuberculosis(pattern, dryrun = TRUE)

Arguments

pattern	regular expression pattern to look for in the titles of resources available in tuberculosis; "." will return all resources
dryrun	if TRUE (the default), a character vector of resource names is returned invisibly; if FALSE, a list of resources is returned

Value

if dryrun = TRUE, a character vector of resource names is returned invisibly; if dryrun = FALSE, a list of resources is returned

Examples

tuberculosis("GSE103147")

schifferl/tuberculosis documentation built on April 22, 2024, 9:32 a.m.