schneebergerlab/findGSE: Estimating Genome Size by Fitting k-mer Frequencies in Reads with Skew Normal Distribution Model

findGSE is a tool for estimating size of (heterozygous diploid or homozygous) genomes by fitting k-mer frequencies iteratively with a skew normal distribution model. Dependencies (R library) required: pracma, fGarch - see INSTALL.

Getting started

Package details

AuthorHequan Sun, MPIPZ (Koeln, Germany)
Maintainer<[email protected]>
Licensefile LICENSE
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
schneebergerlab/findGSE documentation built on Sept. 20, 2017, 7:25 p.m.