occurrencelist: occurrencelist description

In sckott/rgbif_scott: Interface to the Global Biodiversity Information Facility API methods

Description

occurrencelist description

Usage

  occurrencelist(sciname = NA, taxonconceptKey = NA,
    dataproviderkey = NA, dataresourcekey = NA,
    resourcenetworkkey = NA, basisofrecordcode = NA,
    minlatitude = NA, maxlatitude = NA, minlongitude = NA,
    maxlongitude = NA, minaltitude = NA, maxaltitude = NA,
    mindepth = NA, maxdepth = NA, cellid = NA,
    centicellid = NA, typesonly = NA,
    georeferencedonly = NA, coordinatestatus = NA,
    coordinateissues = NA, hostisocountrycode = NA,
    originisocountrycode = NA, originregioncode = NA,
    startdate = NA, enddate = NA, startyear = NA,
    endyear = NA, year = NA, month = NA, day = NA,
    modifiedsince = NA, startindex = NA, maxresults = 10,
    format = NA, icon = NA, mode = NA, stylesheet = NA,
    latlongdf = FALSE, removeZeros = FALSE,
    url = "http://data.gbif.org/ws/rest/occurrence/list?",
    ..., curl = getCurlHandle())

Arguments

sciname	scientitic name of taxon (character, see example)
taxonconceptKey	unique key for taxon (numeric)
dataproviderkey	Filter records to those provided by the supplied numeric key for a data provider. See provider(). (character)
dataresourcekey	Filter records to those provided by the supplied numeric key for a data resource See resource(). (character)
resourcenetworkkey	<what param does>
basisofrecordcode	return only records with the specified basis of record. Supported values are: "specimen, observation, living, germplasm, fossil, unknown". (character)
minlatitude	return only records from locations with latitudes greater than the supplied value (southern hemisphere with negative latitudes). (numeric)
maxlatitude	return only records from locations with latitudes lower than the supplied value (southern hemisphere with negative latitudes). (numeric)
minlongitude	return only records from locations with longitudes greater than the supplied value (western hemisphere with negative longitudes). (numeric)
maxlongitude	return only records from locations with longitudes lower than the supplied value (western hemisphere with negative longitudes). (numeric)
minaltitude	return only records from altitudes greater than or equal to the supplied value. (integer)
maxaltitude	return only records from altitudes less than or equals to the supplied value. (integer)
mindepth	return only records from depth greater than or equal to the supplied value. (numeric 2 decimal places)
maxdepth	return only records from depth less than or equals to the supplied value. (numeric 2 decimal places)
cellid	identifier for a one degree cell (O - 64,799)
centicellid	identifier for a 0.1 degree cell within a one degree cell
typesonly	if set to "true", return only records with a type status specified.
georeferencedonly	This option is deprecated.
coordinatestatus	if set to "true", return only records with coordinates. If set to "false", return only records without coordinates.
coordinateissues	if set to "true", return only records for which the portal has detected possible issues in georeferencing. If set to "false", return only records for which the portal has not detected any such issues.
hostisocountrycode	return only records served by providers from the country identified by the supplied 2-letter ISO code.
originisocountrycode	return only records of occurrences which occurred within the country identified by the supplied 2-letter ISO code.
originregioncode	return only records of occurrences which occurred within the region identified by the supplied 3-letter code.
startdate	return only records occurring on or after the supplied date (format YYYY-MM-DD, e.g. 2006-11-28).
enddate	return only records occurring on or before the supplied date (format YYYY-MM-DD, e.g. 2006-11-28).
startyear	return only records from during or after the supplied year.
endyear	return only records from during or before the supplied year.
year	return only records from during the supplied year.
month	return only records from during the supplied month (expressed as an integer in the range 1 to 12).
day	return only records from during the supplied day of month (expressed as an integer in the range 1 to 31).
modifiedsince	return only records which have been indexed or modified in the GBIF data portal index on or after the supplied date (format YYYY-MM-DD, e.g. 2006-11-28).
startindex	return the subset of the matching records that starts at the supplied (zero-based index).
maxresults	max number of results (integer) (1-10000)
format	specifies the format in which the records are to be returned,
icon	<what param does>
mode	specifies whether the response data should (as far as possible) be the raw values originally retrieved from the data resource or processed (normalised) values used within the data portal (character)
stylesheet	sets the URL of the stylesheet to be associated with the
latlongdf	return a data.frame of lat/long's for all occurrences (logical)
removeZeros	remove records with both Lat Long zero values (logical)
url	the base GBIF API url for the function (should be left to default)
...	optional additional curl options (debugging tools mostly)
curl	If using in a loop, call getCurlHandle() first and pass the returned value in here (avoids unnecessary footprint)

Examples

## Not run: 
occurrencelist(sciname = 'Accipiter erythronemius', coordinatestatus = TRUE, maxresults = 100)

## End(Not run)

sckott/rgbif_scott documentation built on May 29, 2019, 4:04 p.m.