bed2Julia | send a bed file or df to Julia as a... |
callArmCna | Wrapper around CallWcna() that calls chromosome arm... |
callWcna | Call Whole chromosome aneuploidies from segments based on a... |
dot-parseC | private function to parse common stuff out of any... |
dot-parseS | internal functions to parse the results of a... |
dot-parseZ | internal functions to parse the results of a... |
fractionAltered | Calculates the fraction of the genome altrered in a given... |
getName | extracts a file name from a path with leading /s and trailing... |
hg38_centromeres | hg38 centromeres cached human hg38 centromeres, using the... |
hg38_telomeres | hg38 telomeres cached human hg38 telomeric regions using the... |
plotPermResults | Plots the permutation test in GenomePermutations.jl in... |
queryUcsc | deal with the UCSC genome browser mySQL server wrapper around... |
splitBp | Split each record in a bedfile df into 2 breakpoints |
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