pbla_partial: PBLA for stochastic epidemic model

View source: R/partial.R

pbla_partialR Documentation

PBLA for stochastic epidemic model

Description

Compute pair-based likelihood approximation. Supports Erlang infectious periods.

Usage

pbla_partial(r, beta, gamma, m = 1, A = 1, lag = 0)

Arguments

r

numeric vector: removal times

beta

matrix of rates

gamma

numeric vector of rates

m

positive integer shape

A

integer patient zeros

lag

numeric fixed lag

Value

negative log likelihood


sdtemple/incompleteSEM documentation built on Feb. 22, 2023, 10:13 a.m.