lotvolt_comp: Run Lotka-Voltera comparison simulation

In seananderson/ecofoliosim: Simulations of community dynamics for portfolio optimization

Description

A wrapper function to facilitate running simulations for two species.

Usage

lotvolt_comp(w1, b, obs_errors = 0, u_d, u_e, burnin = 100,
  sample_scale = 1L, sigma_e = 0.03, return_ts = FALSE)

Arguments

w1	Weight for species 1
b	Competition matrix
obs_errors	Either 0 (no observation errors) or a matrix of observation errors
u_d	Mean 0, standard deviation 1 demographic deviations.
u_e	Mean 0, standard deviation 1 environmental deviations.
burnin	How many iterations to discard as burnin.
sample_scale	How often to sample the 'truth'. If set to 1 then all observations are kept. If set to 2, for example, then every second observation is discarded.
sigma_e	Environmental standard deviation values to pass on.
return_ts	Logical: should the time series of species biomasses be returned or the mean-variance statistics?

seananderson/ecofoliosim documentation built on May 29, 2019, 4:25 p.m.