OmicIDXQuery: A container for OmicIDXR queries

In seandavi/OmicIDXR: Query the OmicIDX genomic data index API

Description

A container for OmicIDXR queries

Usage

OmicIDXQuery

Format

An object of class R6ClassGenerator of length 24.

Examples

# create a client
cli = OmicIDXGraphqlClient$new()

# create a query container
qc = OmicIDXQuery$new()

qc$query('allSraStudies', '
{ allSraStudies
  {
    edges {
      node {
        accession
        bioproject
        gse
        title
        status
        updated
      }
    }
  }
}
')

results = dataframe_handler(cli$exec(qc$queries$allSraStudies))
dim(results)
head(results)

seandavi/OmicIDXR documentation built on May 21, 2019, 11:42 a.m.