IGVgoto: Go to a specified region in IGV.

Description Usage Arguments Author(s) References See Also Examples

View source: R/IGVapi.R

Description

Using the remote command port of IGV, go to a specified region.

Usage

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IGVgoto(sock, region)

Arguments

sock

A socket connection to IGV.

region

Scrolls to a locus. Use any text that is valid in the IGV search box.

Author(s)

Sean Davis <[email protected]>

References

http://www.broadinstitute.org/igv/PortCommands

See Also

startIGV, IGVload

Examples

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  ## Not run: 
  sock <- IGVsocket()
  IGVgoto(sock, 'chr1:1-10000')
  IGVgoto(sock, 'TP53')
  
## End(Not run)

seandavi/SRAdb documentation built on Feb. 21, 2018, 5:21 a.m.