tbl_to_fasta: Covert a data frame into a fasta file. The data frame must...
In seankross/warppipe: Phylogenetic Annotation Pipeine for Biological Sequences
Description
Usage
Arguments
Examples
Description
Covert a data frame into a fasta file. The data frame must have sequence
descriptions in the first column and sequences in the second column.
Usage
1
tbl_to_fasta(tbl, file, append = FALSE)
Arguments
tbl
Data frame to convert.
file
Name of fasta file to be created.
append
Set to TRUE if you wish to append to a fasta file that already exists.
Examples
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## Not run:
sequences <- seq_tbl("reads.fasta")
tbl_to_fasta(sequences[1:10,], "first_ten_reads.fasta")
## End(Not run)
seankross/warppipe documentation built on May 29, 2019, 4:55 p.m.
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Description Usage Arguments Examples
Description
Covert a data frame into a fasta file. The data frame must have sequence descriptions in the first column and sequences in the second column.
Usage
1 | tbl_to_fasta(tbl, file, append = FALSE)
|
Arguments
tbl |
Data frame to convert. |
file |
Name of fasta file to be created. |
append |
Set to |
Examples
1 2 3 4 5 6 7 | ## Not run:
sequences <- seq_tbl("reads.fasta")
tbl_to_fasta(sequences[1:10,], "first_ten_reads.fasta")
## End(Not run)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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