HistolNumbOfBx: Extract the number of biopsies taken from the histology...
In sebastiz/EndoMineR: Functions to mine endoscopic and associated pathology datasets
View source: R/Basic_EndoPathExtractors.R
HistolNumbOfBx R Documentation
Extract the number of biopsies taken from the histology report
Description
This extracts the number of biopsies taken from the pathology report.
This is usually from the Macroscopic description column.
It collects everything from the regex [0-9]1,2.0,3
to whatever the string boundary is (z).
Usage
HistolNumbOfBx(inputString, regString)
Arguments
inputString
The input text to process
regString
The keyword to remove and to stop at in the regex
See Also
Other Histology specific cleaning functions:
HistolBxSize(),
HistolTypeAndSite()
Examples
qq <- HistolNumbOfBx(Mypath$Macroscopicdescription, "specimen")
sebastiz/EndoMineR documentation built on Dec. 4, 2022, 7:04 p.m.
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View source: R/Basic_EndoPathExtractors.R
| HistolNumbOfBx | R Documentation |
Extract the number of biopsies taken from the histology report
Description
This extracts the number of biopsies taken from the pathology report. This is usually from the Macroscopic description column. It collects everything from the regex [0-9]1,2.0,3 to whatever the string boundary is (z).
Usage
HistolNumbOfBx(inputString, regString)
Arguments
inputString |
The input text to process |
regString |
The keyword to remove and to stop at in the regex |
See Also
Other Histology specific cleaning functions:
HistolBxSize(),
HistolTypeAndSite()
Examples
qq <- HistolNumbOfBx(Mypath$Macroscopicdescription, "specimen")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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