API for sergeitarasov/PhenoTraits
Trait modeling on phylogenies
| Global functions | |
|---|---|
| ExpLinLn | Source code |
| ExpLinLn_Intg | Source code |
| ExpMat_C | Man page Source code |
| Exp_2Q_C | Source code |
| Exp_2Q_scen3_C | Source code |
| KLD_K_phylo | Source code |
| KLD_phylo | Source code |
| addTipChars | Man page Source code |
| birth_Des | Man page Source code |
| comb2matrices | Man page Source code |
| data.sim | Man page |
| edgePatRecode | Man page Source code |
| exp_2Q | Source code |
| exp_2Q_scen3 | Source code |
| exp_Q | Source code |
| getEdgeProps | Source code |
| getEdgeProps_one | Source code |
| getEdgeScenarios | Man page Source code |
| getPhyloCTMC_distr | Man page Source code |
| get_edgePattern | Source code |
| get_edgePattern.character | Source code |
| get_edgePattern.list | Source code |
| infer2branchTrees | Man page Source code |
| init_char_matrix | Man page Source code |
| integrate2_Exp | Source code |
| integrate2_Exp_C | Source code |
| integrateOneBirth | Source code |
| integrateOneBirth_C | Source code |
| integrateScen3 | Source code |
| integrateScen3_C | Source code |
| integrate_Exp | Source code |
| integrate_Exp_C | Source code |
| integrate_Exp_C_vec | Source code |
| is.sequential | Source code |
| iterSearch_Sinba | Source code |
| iter_new_Qcom | Man page Source code |
| iter_runExpLinLn | Source code |
| likelihood_Sinba | Man page Source code |
| make_lik_bins | Source code |
| make_lik_bins_all | Source code |
| mk_OneRate | Man page Source code |
| mk_Pindv | Man page Source code |
| mk_Qcom | Man page Source code |
| mk_QcomPartitions | Man page Source code |
| mk_QcomPartitions8 | Man page Source code |
| mk_Qindv | Man page Source code |
| mk_QindvZero | Man page Source code |
| mk_RatePars | Man page Source code |
| mrca_edges | Source code |
| patternList | Man page Source code |
| print.edge_scenarios | Man page Source code |
| print.sinba | Man page Source code |
| recode2chars_row | Source code |
| runExpLinLn | Source code |
| runSinba | Man page Source code |
| simDarwin | Man page Source code |
| simUnrepBurst | Man page Source code |
| simulate_ExpLinLn | Man page Source code |
| vExpMat_C | Man page Source code |
| vExp_2Q_scen3_C | Source code |
| vExp_2Q_t1_C | Source code |
