subset_ratios: Save subset of ratios

In sgrote/NanoStringNormalizeR: Normalize all NanoString .RCC files in a directory

Description

Save a subset of a .csv file with genes in the first column, like 'ratio.csv' or 'fold_change.csv' created by norm_fc, given a list of genes to filter for. The output will be written to the same directory as the input ratio_csv file.

Usage

subset_ratios(ratio_csv, genes_csv, outfile="ratio_subset.csv")

Arguments

ratio_csv	character(), .csv file with genes in first column, like 'ratio.csv' which is created by norm_fc
genes_csv	character(), .csv file with genes to filter for in first column
outfile	optional character() for the output filename. The output will be written to the same directory as the input ratio_csv file.

Value

invisible NULL Side effects: Creates outfile in the same folder as the ratio_csv

Author(s)

Steffi Grote

sgrote/NanoStringNormalizeR documentation built on Dec. 30, 2020, 7:45 p.m.