Files in shaelebrown/TDAML
Machine Learning and Inference for Topological Data Analysis

.Rbuildignore

.gitignore

CRAN-SUBMISSION

DESCRIPTION

NAMESPACE

NEWS.md R/RcppExports.R R/TDApplied-package.R R/analyze_representatives.R R/bootstrap.R R/convert.R R/distance_calculations.R R/enclosing_rad.R R/inference.R R/kernel_calculations.R R/machine_learning.R R/plot.R R/python_functions.R R/rips_complexes.R R/utilities.R R/zzz.R README.Rmd README.md

TDApplied.Rproj

cran-comments.md exec/TDApplied_HCP.R exec/benchmarking_and_vignette_figures.R exec/parallel_with_approximation.R man/PyH.Rd man/TDApplied-package.Rd man/analyze_representatives.Rd man/bootstrap_persistence_thresholds.Rd man/check_PyH_setup.Rd man/check_ripser.Rd man/diagram_distance.Rd man/diagram_kernel.Rd man/diagram_kkmeans.Rd man/diagram_kpca.Rd man/diagram_ksvm.Rd man/diagram_mds.Rd man/diagram_to_df.Rd man/distance_matrix.Rd man/enclosing_radius.Rd man/gram_matrix.Rd man/import_ripser.Rd man/independence_test.Rd man/loss.Rd man/permutation_model_inference.Rd man/permutation_test.Rd man/plot_diagram.Rd man/plot_vr_graph.Rd man/predict_diagram_kkmeans.Rd man/predict_diagram_kpca.Rd man/predict_diagram_ksvm.Rd man/universal_null.Rd man/vr_graphs.Rd

src/ANN.cpp

src/ANN.h

src/ANN.o

src/ANNperf.h

src/ANNx.h

src/KCenterClustering.cpp

src/KCenterClustering.h

src/KCenterClustering.o

src/Makevars.win

src/RcppExports.cpp

src/RcppExports.o

src/TDApplied.so

src/bd_fix_rad_search.cpp

src/bd_fix_rad_search.o

src/bd_pr_search.cpp

src/bd_pr_search.o

src/bd_search.cpp

src/bd_search.o

src/bd_tree.cpp

src/bd_tree.h

src/bd_tree.o

src/brute.cpp

src/brute.o

src/figtree.cpp

src/figtree.h

src/figtree.o

src/figtree_internal.h

src/kd_dump.cpp

src/kd_dump.o

src/kd_fix_rad_search.cpp

src/kd_fix_rad_search.h

src/kd_fix_rad_search.o

src/kd_pr_search.cpp

src/kd_pr_search.h

src/kd_pr_search.o

src/kd_search.cpp

src/kd_search.h

src/kd_search.o

src/kd_split.cpp

src/kd_split.h

src/kd_split.o

src/kd_tree.cpp

src/kd_tree.h

src/kd_tree.o

src/kd_util.cpp

src/kd_util.h

src/kd_util.o

src/matrix.h

src/perf.cpp

src/perf.o

src/pr_queue.h

src/pr_queue_k.h

tests/testthat.R tests/testthat/test-MDS.R tests/testthat/test-bootstrap.R tests/testthat/test-convert.R tests/testthat/test-distance.R tests/testthat/test-enclosing.R tests/testthat/test-inference.R tests/testthat/test-kernel.R tests/testthat/test-kmeans.R tests/testthat/test-pca.R tests/testthat/test-plot.R tests/testthat/test-python.R tests/testthat/test-representatives.R tests/testthat/test-rips.R tests/testthat/test-svm.R tests/testthat/test-utilities.R

vignettes/.gitignore

vignettes/HCP_analysis.Rmd vignettes/ML_and_Inference.Rmd

vignettes/REFERENCES.bib

vignettes/Speed.Rmd

vignettes/cols.rds

vignettes/cols_respiratory.rds

vignettes/cols_time_since_last_block.rds

vignettes/comparing_calcs.Rmd

vignettes/emb.rds

vignettes/personalized_analyses.Rmd

vignettes/r_face.rds

vignettes/r_nodes.png

vignettes/r_shape.rds

vignettes/rips_all.rds

vignettes/rips_cycle.rds

vignettes/rips_secondary.rds

vignettes/shape_rt.rds

vignettes/theta_nodes.png

vignettes/thresh.rds

shaelebrown/TDAML documentation built on Nov. 1, 2024, 8:59 a.m.

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shaelebrown/TDAML
Machine Learning and Inference for Topological Data Analysis

Files in shaelebrown/TDAML
Machine Learning and Inference for Topological Data Analysis

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shaelebrown/TDAML Machine Learning and Inference for Topological Data Analysis

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shaelebrown/TDAML
Machine Learning and Inference for Topological Data Analysis

Files in shaelebrown/TDAML
Machine Learning and Inference for Topological Data Analysis