Files in shannong19/simCAM
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/ggplot.R
R/ggplot.R~
R/optim.R
R/optim.R~
R/s2ir2-system.R
R/s2ir2-system.R~
R/seir-system.R
R/seir-system.R~
R/sir-system.R
README.Rmd
README.html
figure_production/figures-am-cm.Rmd
figure_production/figures-am-cm.html
figure_production/figures-am-cm.pdf
figure_production/figures-am-cm_cache/latex/__packages
figure_production/figures-am-cm_cache/latex/install_fdc90662e61d87301050e849c43afbb1.RData
figure_production/figures-am-cm_cache/latex/install_fdc90662e61d87301050e849c43afbb1.rdb
figure_production/figures-am-cm_cache/latex/install_fdc90662e61d87301050e849c43afbb1.rdx
figure_production/figures-am-cm_cache/latex/local-load_980d122abd77bd4cc13a14059eb43ee3.RData
figure_production/figures-am-cm_cache/latex/local-load_980d122abd77bd4cc13a14059eb43ee3.rdb
figure_production/figures-am-cm_cache/latex/local-load_980d122abd77bd4cc13a14059eb43ee3.rdx
figure_production/figures-am-cm_cache/latex/packages_abfdd0b3aace167460368486231019fc.RData
figure_production/figures-am-cm_cache/latex/packages_abfdd0b3aace167460368486231019fc.rdb
figure_production/figures-am-cm_cache/latex/packages_abfdd0b3aace167460368486231019fc.rdx
figure_production/figures-am-cm_cache/latex/s2ir2-cm-det_5b9ded75e1d95e311207e143e6f92367.RData
figure_production/figures-am-cm_cache/latex/s2ir2-cm-det_5b9ded75e1d95e311207e143e6f92367.rdb
figure_production/figures-am-cm_cache/latex/s2ir2-cm-det_5b9ded75e1d95e311207e143e6f92367.rdx
figure_production/figures-am-cm_cache/latex/s2ir2-sims_2f2d2c3f649be2758eaae119115579b8.RData
figure_production/figures-am-cm_cache/latex/s2ir2-sims_2f2d2c3f649be2758eaae119115579b8.rdb
figure_production/figures-am-cm_cache/latex/s2ir2-sims_2f2d2c3f649be2758eaae119115579b8.rdx
figure_production/figures-am-cm_cache/latex/s2ir2-stochastic_f8871143d871e91dc003e27336668bda.RData
figure_production/figures-am-cm_cache/latex/s2ir2-stochastic_f8871143d871e91dc003e27336668bda.rdb
figure_production/figures-am-cm_cache/latex/s2ir2-stochastic_f8871143d871e91dc003e27336668bda.rdx
figure_production/figures-am-cm_cache/latex/s2ir2-sum_ee27250d4c78f792e890a7fea943fc55.RData
figure_production/figures-am-cm_cache/latex/s2ir2-sum_ee27250d4c78f792e890a7fea943fc55.rdb
figure_production/figures-am-cm_cache/latex/s2ir2-sum_ee27250d4c78f792e890a7fea943fc55.rdx
figure_production/figures-am-cm_cache/latex/sir-avg_612fc488c29287a272f74df6750de301.RData
figure_production/figures-am-cm_cache/latex/sir-avg_612fc488c29287a272f74df6750de301.rdb
figure_production/figures-am-cm_cache/latex/sir-avg_612fc488c29287a272f74df6750de301.rdx
figure_production/figures-am-cm_cache/latex/sir-cm_7a822e1c13c76a95995d69cfc97b0ea8.RData
figure_production/figures-am-cm_cache/latex/sir-cm_7a822e1c13c76a95995d69cfc97b0ea8.rdb
figure_production/figures-am-cm_cache/latex/sir-cm_7a822e1c13c76a95995d69cfc97b0ea8.rdx
figure_production/figures-am-cm_cache/latex/sir-draws_b715f06ce5c6d370cdb79c13dbe82bc1.RData
figure_production/figures-am-cm_cache/latex/sir-draws_b715f06ce5c6d370cdb79c13dbe82bc1.rdb
figure_production/figures-am-cm_cache/latex/sir-draws_b715f06ce5c6d370cdb79c13dbe82bc1.rdx
figure_production/figures-am-cm_cache/latex/sir-var_4ee62ae6b3ff1be8b038ce42e9c4257d.RData
figure_production/figures-am-cm_cache/latex/sir-var_4ee62ae6b3ff1be8b038ce42e9c4257d.rdb
figure_production/figures-am-cm_cache/latex/sir-var_4ee62ae6b3ff1be8b038ce42e9c4257d.rdx
figure_production/figures-am-cm_cache/latex/stochastic-sir-am_3074df22ae5935a341d0014c6190cee1.RData
figure_production/figures-am-cm_cache/latex/stochastic-sir-am_3074df22ae5935a341d0014c6190cee1.rdb
figure_production/figures-am-cm_cache/latex/stochastic-sir-am_3074df22ae5935a341d0014c6190cee1.rdx
figure_production/figures-am-cm_cache/latex/stochastic-sir-cm_0850cad178dbddef76d498ce325ed56f.RData
figure_production/figures-am-cm_cache/latex/stochastic-sir-cm_0850cad178dbddef76d498ce325ed56f.rdb
figure_production/figures-am-cm_cache/latex/stochastic-sir-cm_0850cad178dbddef76d498ce325ed56f.rdx
figure_production/figures-am-cm_files/figure-latex/s2ir2-cm-det-1.pdf
figure_production/figures-am-cm_files/figure-latex/s2ir2-sims-1.pdf
figure_production/figures-am-cm_files/figure-latex/s2ir2-sum-1.pdf
figure_production/figures-am-cm_files/figure-latex/s2ir2-sum-2.pdf
figure_production/figures-am-cm_files/figure-latex/s2ir2-sum-3.pdf
figure_production/figures-am-cm_files/figure-latex/s2ir2-sum-4.pdf
figure_production/figures-am-cm_files/figure-latex/sir-avg-1.pdf
figure_production/figures-am-cm_files/figure-latex/sir-draws-1.pdf
figure_production/figures-am-cm_files/figure-latex/sir-var-1.pdf
figure_production/figures-am-cm_files/figure-latex/time-s-1.pdf
figure_production/figures-am-cm_files/figure-latex/time-s-2.pdf
figure_production/figures-am-cm_files/figure-latex/time-s-3.pdf
figure_production/figures-am-cm_files/figure-latex/time-s-4.pdf
images/am-cm-i.pdf
images/am-cm-r1.pdf
images/am-cm-r2.pdf
images/am-cm-s1s2.pdf
images/am-sir2-avg.pdf
images/am-sir2-time.png
images/am-sir2-var.pdf
images/am-sir2.png
images/cm-am-s2ir2.png
images/cm-sir2-avg.pdf
images/cm-sir2-time.png
images/cm-sir2-var.pdf
images/cm-sir2.png
images/draws-sir.png
images/sir-mean.pdf
images/sir-var.pdf
simCAM.Rproj
sims/agents-sir2.RDS
sims/cm-sim-list-sir2.RDS
sims/out_agents.RDS
tests/testthat.R
tests/testthat/test-seir.R
tests/testthat/test-seir.R~
tests/testthat/test-sir.R
tests/testthat/test-sir.R~
