benchmark: Automatic benchmark analysis using CITEdb

In shanny01/benchmark: benchmark analysis using CITEdb

Automatic benchmark analysis using CITEdb

Description

Returns the precision-recall curves and tables of precision-recall values of benchmark analysis using CITEdb

Usage

benchmark(assess)

Arguments

assess

text files with predicted cell-cell interactions

Value

the precision-recall curves and tables of precision-recall values

Examples

library(ggplot2)
library(dplyr)
library(yardstick)
library(benchmark)

#load example data
data('Default.sum')
#benchmark one algorithm
benchmark(Default.sum[[1]])

#benchmark multiple algorithms at once
input = do.call(rbind,Default.sum)
benchmark(asses=input)

shanny01/benchmark documentation built on Oct. 5, 2022, 3:51 p.m.