shaunpwilkinson/kmer: Fast K-Mer Counting and Clustering for Biological Sequence Analysis
Version 1.0.2.9000

Contains tools for rapidly computing distance matrices and clustering large sequence datasets using fast alignment-free k-mer counting and recursive k-means partitioning. See Vinga and Almeida (2003) for a review of k-mer counting methods and applications for biological sequence analysis.

Getting started

Package details

AuthorShaun Wilkinson [aut, cre]
MaintainerShaun Wilkinson <[email protected]>
LicenseGPL-3
Version1.0.2.9000
URL http://github.com/shaunpwilkinson/kmer
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("shaunpwilkinson/kmer")
shaunpwilkinson/kmer documentation built on April 24, 2018, 7:08 a.m.