sheng-liu/SeqFrame: an interface between genomic intervals spread sheet data to flow cytometry facilities in R.

SeqFrame is essentially a flowFrame class added a data.frame describing the corresponding genomic annotation of channels. It provides facilities for convert essentially any spead sheet data (csv, table, data.frame, bigWig, bed) into SeqFrame, so facilitate user to easy access to the full functionality of flow cytometry packages such as flowCore and flowViz. and then use visualize it with rtracklayer.

Getting started

Package details

AuthorSheng Liu
MaintainerSheng Liu <shengl@interchange.ubc.ca>
LicenseArtistic-2.0
Version1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("sheng-liu/SeqFrame")
sheng-liu/SeqFrame documentation built on May 29, 2019, 9:22 p.m.