API for shenorrLab/cellAlign
Global and local alignment of single cell trajectories
| Global functions | |
|---|---|
| .Pend | Source code |
| .Pnew | Source code |
| .Pstep | Source code |
| .PtoMx | Source code |
| .RJtypeI | Source code |
| .RJtypeII | Source code |
| .RJtypeIII | Source code |
| .RJtypeIV | Source code |
| .RJtypeV | Source code |
| .RJtypeVI | Source code |
| .RJtypeVII | Source code |
| .checkpattern | Source code |
| .extractpattern | Source code |
| .mkDirDeltas | Source code |
| `backtrack2` | Source code |
| `globalCostMatrix` | Source code |
| `itakuraWindow` | Source code |
| `noWindow` | Source code |
| `sakoeChibaWindow` | Source code |
| `slantedBandWindow` | Source code |
| calPtMetaNode | Source code |
| calcDistMat | Man page Source code |
| dtwWindow.plot | Source code |
| findGlobalMinima | Man page Source code |
| findLocalMinima | Man page Source code |
| globalAlign | Man page Source code |
| ind2sub | Man page Source code |
| interWeights | Man page Source code |
| is.stepPattern | Source code |
| localAlign | Man page Source code |
| localAlignAutoThreshold | Man page Source code |
| mapRealDataGlobal | Man page Source code |
| mapRealDataLocal | Man page Source code |
| metaNodesAssign | Source code |
| metaNodesMapping | Source code |
| plot.stepPattern | Source code |
| plotAlign | Man page Source code |
| plotMapping | Man page Source code |
| print.stepPattern | Source code |
| pseudotimeClust | Man page Source code |
| rabinerJuangStepPattern | Source code |
| scaleInterpolate | Man page Source code |
| stepPattern | Source code |
| sub2ind | Man page Source code |
| t.stepPattern | Source code |
