matoedge: Convert a correlation matrix to a weighted edge list or...

In shkonishi/cornet: Cunstruction of correlation network form transcriptome data

Description

Convert a correlation matrix to a weighted edge list from lower triangled data. if this matrix is named matrix, these names as node id.

Usage

matoedge(mat, diag, zero.weight, format)

Arguments

mat	A squared and synmetric matrix, like a correlation matirx.
diag	default, FALSE
zero.weight	default, FALSE
format	select "igraph"(default) or "df" .

Examples

mat <- cor(iris[-5])
matoedge(mat = mat)
matoedge(mat = mat, diag = TRUE, format = "df")

shkonishi/cornet documentation built on May 30, 2019, 7:09 p.m.