View source: R/file_utilities.R
import_merge_gamet_rb | R Documentation |
Import a ReaderBench output file(.csv) and GAMET output file (.csv) into R, and merge the two files.
import_merge_gamet_rb(rb_path, gamet_path)
rb_path |
A string giving the path and ReaderBench filename to import. |
gamet_path |
A string giving the path and GAMET filename to import. |
predict_quality
##Example 1:
#Using a sample data files included with writeAlizer package
#load package
library(writeAlizer)
#get path of sample ReaderBench output file
file_path1 <- system.file("extdata", "sample_rb.csv", package = "writeAlizer")
#see path to sample ReaderBench file
file_path1
#get path of sample GAMET output file
file_path2 <- system.file("extdata", "sample_gamet.csv", package = "writeAlizer")
#see path to sample GAMET file
file_path2
#import files, merge, and store as "rb_gam_file"
rb_gam_file <- import_merge_gamet_rb(file_path1, file_path2)
##Example 2:
#To import as "rb_gam_file" a ReaderBench file (sample name: rb_output.csv)
#and GAMET file (sample name: gamet_output.csv) stored in the working
#directory and then merge them
## Not run:
rb_gam_file <- import_merge_gamet_rb("rb_output.csv", "gamet_output.csv")
## End(Not run)
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