API for shmohammadi86/ACE
ACTIONetExperiment container object
| Global functions | |
|---|---|
| .DollarNames.ACTIONetExperiment | Source code |
| .ace_clear_slots | Source code |
| .change_slot_dim_name | Source code |
| .check_and_load_package | Source code |
| .check_if_mapping_list | Source code |
| .coerce_input_to_SE | Source code |
| .default_colData | Source code |
| .default_colnames | Source code |
| .default_rowData | Source code |
| .default_rownames | Source code |
| .insert_MapMeta | Source code |
| .insert_mapping | Source code |
| .make_chars_unique | Source code |
| .set_map_type | Source code |
| .tscalet | Source code |
| .validate_MapType | Source code |
| .validate_names | Source code |
| ACE2AnnData | Source code |
| ACTIONetExperiment | Man page Source code |
| ACTIONetExperiment-class | Man page |
| AnnData2ACE | Source code |
| [,ACTIONetExperiment,ANY,ANY,ANY-method | Man page |
| as.ACTIONetExperiment | Man page Source code |
| as.SingleCellExperiment | Man page Source code |
| as.SummarizedExperiment | Man page Source code |
| bind_mats_dense | Source code |
| bind_mats_sparse | Source code |
| colEmbeddings | Man page |
| colEmbeddings<- | Man page |
| colEmbeddings<-,ACTIONetExperiment-method | Man page |
| colMapMeta | Man page |
| colMapMeta,ACTIONetExperiment-method | Man page |
| colMapMeta<- | Man page |
| colMapMeta<-,ACTIONetExperiment-method | Man page |
| colMapTypes | Man page |
| colMapTypes,ACTIONetExperiment-method | Man page |
| colMapTypes<- | Man page |
| colMapTypes<-,ACTIONetExperiment-method | Man page |
| colMaps | Man page |
| colMaps,ACTIONetExperiment-method | Man page |
| colMaps<- | Man page |
| colMaps<-,ACTIONetExperiment-method | Man page |
| colNets | Man page |
| colNets,ACTIONetExperiment-method | Man page |
| colNets<- | Man page |
| colNets<-,ACTIONetExperiment-method | Man page |
| colReductions | Man page |
| colReductions<- | Man page |
| colReductions<-,ACTIONetExperiment-method | Man page |
| convert.ace.rownames | Man page Source code |
| csc_sort_indices_inplace | Source code |
| csr_sort_indices_inplace | Source code |
| export.sparse.format | Source code |
| fastColMeans | Source code |
| fastColSums | Source code |
| fastRowMeans | Source code |
| fastRowSums | Source code |
| fast_column_sums | Source code |
| fast_row_max | Source code |
| fast_row_sums | Source code |
| get.data.or.split | Source code |
| h5addAttr.str | Source code |
| h5addAttr.str_array | Source code |
| import.ace.from.10X | Man page Source code |
| import.ace.from.10X.generic | Man page Source code |
| import.ace.from.10X.h5 | Man page Source code |
| import.ace.from.CDS | Man page Source code |
| import.ace.from.Seurat | Man page Source code |
| import.ace.from.counts | Man page Source code |
| import.ace.from.legacy | Source code |
| import.ace.from.loom | Man page Source code |
| import.ace.from.table | Man page Source code |
| import.h5.data.slot | Source code |
| is.sparseMatrix | Source code |
| preprocessDF | Source code |
| read.HD5Categorial | Source code |
| read.HD5DF | Source code |
| read.HD5Dict | Source code |
| read.HD5List | Source code |
| read.HD5SpMat | Source code |
| read.HD5StringArray | Source code |
| rowEmbeddings | Man page |
| rowEmbeddings<- | Man page |
| rowEmbeddings<-,ACTIONetExperiment-method | Man page |
| rowMapMeta | Man page |
| rowMapMeta,ACTIONetExperiment-method | Man page |
| rowMapMeta<- | Man page |
| rowMapMeta<-,ACTIONetExperiment-method | Man page |
| rowMapTypes | Man page |
| rowMapTypes,ACTIONetExperiment-method | Man page |
| rowMapTypes<- | Man page |
| rowMapTypes<-,ACTIONetExperiment-method | Man page |
| rowMaps | Man page |
| rowMaps,ACTIONetExperiment-method | Man page |
| rowMaps<- | Man page |
| rowMaps<-,ACTIONetExperiment-method | Man page |
| rowNets | Man page |
| rowNets,ACTIONetExperiment-method | Man page |
| rowNets<- | Man page |
| rowNets<-,ACTIONetExperiment-method | Man page |
| rowReductions | Man page |
| rowReductions<- | Man page |
| rowReductions<-,ACTIONetExperiment-method | Man page |
| show,ACTIONetExperiment-method | Man page |
| sizeFactors,ACTIONetExperiment-method | Man page |
| sizeFactors<-,ACTIONetExperiment-method | Man page |
| write.HD5DF | Source code |
| write.HD5List | Source code |
| write.HD5SpMat | Source code |
