GetTarget: Match target according to CHEMBL IDs
In shuyuzheng/TidyComb: Preparing drug combination data for DrugComb
GetTarget R Documentation
Match target according to CHEMBL IDs
Description
This function matches target of drugs according to user-provided identifiers.
Usage
GetTarget(chembl_ids)
Arguments
chembl_ids
A vector of characters contains the CHEMBL IDs of drugs
Details
This function queries DTC database via
API
to query targets with CHEMBL ID
Value
A data frame contains two columns:
-
chembl_id Input CHEMBL ID
-
target_gene_name Gene name for the target
-
inhibitor_type The type of the inhibitor
-
target_protein_class The protein class for target
-
target_organism The organism used to test the target activity
-
target_protein_name The protein name for target
Author(s)
Jing Tang jing.tang@helsinki.fi
Shuyu Zheng shuyu.zheng@helsinki.fi
Examples
GetTarget("CHEMBL25")
shuyuzheng/TidyComb documentation built on June 14, 2022, 6:40 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| GetTarget | R Documentation |
Match target according to CHEMBL IDs
Description
This function matches target of drugs according to user-provided identifiers.
Usage
GetTarget(chembl_ids)
Arguments
chembl_ids |
A vector of characters contains the CHEMBL IDs of drugs |
Details
This function queries DTC database via API to query targets with CHEMBL ID
Value
A data frame contains two columns:
-
chembl_idInput CHEMBL ID -
target_gene_nameGene name for the target -
inhibitor_typeThe type of the inhibitor -
target_protein_classThe protein class for target -
target_organismThe organism used to test the target activity -
target_protein_nameThe protein name for target
Author(s)
Jing Tang jing.tang@helsinki.fi Shuyu Zheng shuyu.zheng@helsinki.fi
Examples
GetTarget("CHEMBL25")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.