inst/QueryLibrary/Aggregate/drug/D18.md

In sib-swiss/dsQueryLibraryServer: OMOP query Library

D18: Find ingredients for an indication provided as condition concept

Description

This query provides all ingredients that are indicated for a certain indication. Indications have to be provided as SNOMED-CT concept ID.

Query

SELECT DISTINCT
  ingredient.concept_id as ingredient_concept_id,
  ingredient.concept_name as ingredient_concept_name,
  ingredient.concept_code as ingredient_concept_code
FROM
  @vocab.concept ingredient,
  @vocab.concept_ancestor snomed,
  @vocab.concept_ancestor ind,
  @vocab.concept_relationship r
WHERE
  snomed.ancestor_concept_id = $1 AND
  snomed.descendant_concept_id = r.concept_id_1 AND
  concept_id_2 = ind.ancestor_concept_id AND
  ind.descendant_concept_id = ingredient.concept_id
;

Input

| Parameter | Example | Mandatory | Notes | | --- | --- | --- | --- | | Indication Concept ID | 253954 | Yes | SNOMED-CT indication concept ID |

Output

| Field | Description | | --- | --- | | Ingredient_Concept_ID | Concept ID of the ingredient | | Ingredient_Concept_Name | Name of the ingredient | | Ingredient_Concept_Code | Concept code of the ingredient |

Example output record

| Field | Value | | --- | --- | | Ingredient_Concept_ID | 1790868 | | Ingredient_Concept_Name | Amikacin | | Ingredient_Concept_Code | 641 |

Documentation

https://github.com/OHDSI/CommonDataModel/wiki/

sib-swiss/dsQueryLibraryServer documentation built on Feb. 13, 2025, 8:07 p.m.