summarise_multi: Create useful summary statistics from the output of man_multi

Description Usage Arguments Value Examples

View source: R/albatross_functions.R

Description

Create useful summary statistics from the output of man_multi

Usage

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Arguments

cut_df

The output of man_multi() (?man_multi() for further details)

Value

A tibble contain a row for each group id returned by man_multi(): cut_off - The miniumum cut off value of the the max mid value plateau - The the numer cut off values that with the same max mid value mid - The max mid value (1.0 means perfectly grouped) mid_sum - The sum of the mid values across all considered cut_offs, which is useful for quantifying how isolated the groups are rel_sum - The mid_sum scores, scaled by the maximum mid_sum.

Examples

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sepal_dist <- iris$Sepal.Width %>% dist() %>% as.matrix()
sepal_dist <- sepal_dist/max(sepal_dist)
colnames(sepal_dist) <- iris$Species
cut_df <- man_multi(dist_mat = sepal_dist, res = 2)
summarise_multi(cut_df)

silastittes/albatross documentation built on April 19, 2018, 3:31 a.m.