plot_tpm_entries: Plot entries of transition probability matrices

In simonecollier/lizardHMM: Fitting Lizard Movement Data with HMMs

Description

This function plots the transition probability matrix entries with their confidence intervals for different covariate values.

Usage

plot_tpm_entries(
  num_states,
  covar_vec,
  cov_ci,
  covariate_name = "Temp - mean(Temp)"
)

Arguments

num_states	The number of states in the HMM.
covar_vec	The vector of covariate values to plot the entries over.
covariate_name	Label for the x-axis.
tpm_entries_list	A list of 3 matrices, one for the estimate and the upper, and lower confidence interval, with the rows of the matrices containing the entries of the transition probability matrices at each covariate value.

Value

A list with a plot for each of the transition probability entries varying with the covariate.

simonecollier/lizardHMM documentation built on Dec. 23, 2021, 2:24 a.m.