colMatch: Column match between two matrices by minimum mean absolute...

In single-cell-genetics/cardelino: Clone Identification from Single Cell Data

Column match between two matrices by minimum mean absolute difference

Description

Column match between two matrices by minimum mean absolute difference

Usage

colMatch(A, B, force = FALSE)

Arguments

A	The first matrix which will be matched
B	The second matrix, the return index will be used on
force	bool(1), If TRUE, force traversing all permutations of B to find the optimised match to A with computing cost of O(n!). Otherwise, use greedy search with computing cost of O(n^2).

Value

idx, the column index of B to be matched to A

Examples

matA <- matrix(sample(seq(12)), nrow = 3)
col_idx <- sample(4)
matB <- matA[, col_idx]
colMatch(matB, matA)

single-cell-genetics/cardelino documentation built on Nov. 22, 2022, 4:05 p.m.