phyloAA: phyloAA
In slcornett/sonichedgehog: Phylogenetic Comparative Methods
View source: R/pcm_functions.R
phyloAA R Documentation
phyloAA
Description
This function conducts the multiple alignment and distance calculations for phylogenetic data
Usage
phyloAA(fas_msa)
Arguments
msa
formatted multiple alignment data
Examples
using the built-in Shh_fasta data of sonic hedgehog signal molecule orthologs
file <- "link to raw data on git hub"
pcms_AlignAA(file) # the output of this will be the sequences aligned by the MUSCLE algorithm
slcornett/sonichedgehog documentation built on May 23, 2022, 6:33 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/pcm_functions.R
| phyloAA | R Documentation |
phyloAA
Description
This function conducts the multiple alignment and distance calculations for phylogenetic data
Usage
phyloAA(fas_msa)
Arguments
msa |
formatted multiple alignment data |
Examples
using the built-in Shh_fasta data of sonic hedgehog signal molecule orthologs file <- "link to raw data on git hub" pcms_AlignAA(file) # the output of this will be the sequences aligned by the MUSCLE algorithm
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.