getDynamic: Gets the current number of infected hosts for the full length...

In slequime/nosoi: A Forward Agent-Based Transmission Chain Simulator

Gets the current number of infected hosts for the full length of the simulation

Description

This function computes from the output of a nosoiSim simulation the dynamic count of infected hosts at each time step (and each state if discrete structure) of the simulation. The output is a data.table.

Usage

getDynamic(nosoi.output)

Arguments

nosoi.output

Output of a nosoi simulation (object of class nosoiSim).

Value

The output is a data.table with the following structure:

state

(only when discrete structure) Given state

Count

Current number of infected hosts at given time-step.

type

Host-type, identified by its user-defined prefix.

t

Time-step (integer).

See Also

summary.nosoiSim

slequime/nosoi documentation built on Feb. 15, 2024, 3:31 p.m.