API for snaketron/MultilevelGwas
Genome wide association studies of multiple traits with Bayesian multilvel models
| Global functions | |
|---|---|
| checkAdaptDelta | Source code |
| checkBiallelic | Source code |
| checkGenotypeTrait | Source code |
| checkHdi | Source code |
| checkInput | Source code |
| checkInputPhyloBias | Source code |
| checkMaxTreedepth | Source code |
| checkMcmcChains | Source code |
| checkMcmcCores | Source code |
| checkMcmcSteps | Source code |
| checkMcmcWarmup | Source code |
| checkModel | Source code |
| checkStrains | Source code |
| checkTraitValidity | Source code |
| checkWriteSamples | Source code |
| convertMsaToGenotype | Source code |
| getHdi | Source code |
| getObservedData | Source code |
| getPhyloBias | Source code |
| getPmax | Source code |
| getPmaxVec | Source code |
| getPpc | Source code |
| getPpcFromSampling | Source code |
| getScores | Source code |
| getStanFormat | Source code |
| getStanModel | Source code |
| getStanModelDebug | Source code |
| getStanModelDebugReal | Source code |
| getStanModelPars | Source code |
| readPosterior | Source code |
| runComparison | Source code |
| runGwas | Source code |
| runInference | Source code |
| runPhyloBiasCheck | Source code |
