IGHV_HCV: IGHV gene usage in HCV+ and healthy individuals
In snaketron/test_repo: Differential gene usage in immune repertoires
Description
Usage
Format
Source
Examples
Description
Publicly available dataset of IGHV segment usage in memory B-cells of 22 HCV+
individuals and 7 healthy donors.
Usage
1
data("IGHV_HCV")
Format
A data frame with 4 columns: "sample_id", "condition", "gene_name" and
"gene_usage_count". The format of the data is suitible to be used as input in
IgGeneUsage
Source
Tucci, Felicia A., et al. "Biased IGH VDJ gene repertoire and clonal
expansions in B cells of chronically hepatitis C virus–infected individuals."
Blood 131.5 (2018): 546-557.
Examples
1
2
snaketron/test_repo documentation built on Dec. 23, 2021, 3:28 a.m.
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Description Usage Format Source Examples
Description
Publicly available dataset of IGHV segment usage in memory B-cells of 22 HCV+ individuals and 7 healthy donors.
Usage
1 | data("IGHV_HCV")
|
Format
A data frame with 4 columns: "sample_id", "condition", "gene_name" and "gene_usage_count". The format of the data is suitible to be used as input in IgGeneUsage
Source
Tucci, Felicia A., et al. "Biased IGH VDJ gene repertoire and clonal expansions in B cells of chronically hepatitis C virus–infected individuals." Blood 131.5 (2018): 546-557.
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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