src/README-update-pwiz.md

In sneumann/mzR: parser for netCDF, mzXML and mzML and mzIdentML files (mass spectrometry data)

Updating PWIZ

• Check out a copy of https://github.com/ProteoWizard/pwiz somewhere

• The pwiz version is in ./pwiz/Version.cpp, e.g. 3_0_20294

• Move old stuff away: cp -avx pwiz pwiz-old git rm -rf pwiz

Updating CVs

#!/bin/bash
set -x
cd src

PWIZGITHUBPREFIX=https://raw.githubusercontent.com/ProteoWizard/pwiz/master

CVFILES="pwiz/data/common/CVTranslator.cpp \
  pwiz/data/common/CVTranslator.hpp \
  pwiz/data/common/CVTranslatorTest.cpp \
  pwiz/data/common/cv.cpp pwiz/data/common/cv.hpp \
  pwiz/data/common/psi-ms.obo"

for F in $CVFILES ; do
  wget -O $F $PWIZGITHUBPREFIX/$F
done

sneumann/mzR documentation built on Oct. 14, 2024, 12:42 a.m.