get_bw_matrix: Get signal matrix for regions using bigwig input
In snystrom/didactic-potato:
View source: R/get_bw_matrix.R
get_bw_matrix R Documentation
Get signal matrix for regions using bigwig input
Description
Get signal matrix for regions using bigwig input
Usage
get_bw_matrix(
bw,
regions,
type = c("mean", "min", "max", "coverage", "sd"),
by = NULL
)
Arguments
bw
an [rtracklayer::BigWigFile], [rtracklayer::BigWigFileList] or path to bigwig file
regions
a GRanges object (all regions must be equal width)
type
one of: c("mean", "min", "max", "coverage", "sd")
Value
a matrix of bigwig signal.
snystrom/didactic-potato documentation built on Nov. 5, 2024, 12:37 a.m.
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View source: R/get_bw_matrix.R
| get_bw_matrix | R Documentation |
Get signal matrix for regions using bigwig input
Description
Get signal matrix for regions using bigwig input
Usage
get_bw_matrix(
bw,
regions,
type = c("mean", "min", "max", "coverage", "sd"),
by = NULL
)
Arguments
bw |
an [rtracklayer::BigWigFile], [rtracklayer::BigWigFileList] or path to bigwig file |
regions |
a GRanges object (all regions must be equal width) |
type |
one of: c("mean", "min", "max", "coverage", "sd") |
Value
a matrix of bigwig signal.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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