d4_histogram: Collect histogram of d4 file
In snystrom/rd4tools: An Interface to d4tools
Description
Usage
Arguments
Value
Description
Collect histogram of d4 file
Usage
1
d4_histogram(file, regions = NULL, threads = 1, d4tools = NULL)
Arguments
file
d4 file path
regions
optional regions in which to compute histogram values.
Formatted as string: "chr:start-end", or as GRanges. Note coordinates
should use base 1 index, not bed-format 0 index. (default: NULL)
threads
number of threads to use (default: 1)
d4tools
path to d4tools (or use options("d4tools" = "path/to/d4tools"))
Value
data.frame
snystrom/rd4tools documentation built on Dec. 31, 2020, 7:29 a.m.
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Description Usage Arguments Value
Description
Collect histogram of d4 file
Usage
1 | d4_histogram(file, regions = NULL, threads = 1, d4tools = NULL)
|
Arguments
file |
d4 file path |
regions |
optional regions in which to compute histogram values. Formatted as string: "chr:start-end", or as GRanges. Note coordinates should use base 1 index, not bed-format 0 index. (default: NULL) |
threads |
number of threads to use (default: 1) |
d4tools |
path to d4tools (or use options("d4tools" = "path/to/d4tools")) |
Value
data.frame
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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