Description Usage Arguments Value Examples
View source: R/ReadingInFastQC.R
This functions extracts the values for a specific test run by FastQC on a single fastq file.
1 | reading_in(file, test = "Per base sequence quality", input, input2)
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file |
string that specifies the path to an individual FastQC result file (tyically named "fastqc_data.txt" |
test |
Indicate which test results should be extracted. Default: "Per base sequence quality". Other options are, for example, "Per tile sequence quality", "Per sequence quality score" etc. |
data.frame with the values of a single FastQC test result.
1 2 3 4 | ## Not run:
res <- reading_in(file = "acinar-3_S9_L001_R1_001_fastqc/fastqc_data.txt")
## End(Not run)
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