sprouffske/growthcurver: Simple Metrics to Summarize Growth Curves

Fits the logistic equation to microbial growth curve data (e.g., repeated absorbance measurements taken from a plate reader over time). From this fit, a variety of metrics are provided, including the maximum growth rate, the doubling time, the carrying capacity, the area under the logistic curve, and the time to the inflection point. Method described in Sprouffske and Wagner (2016) <doi:10.1186/s12859-016-1016-7>.

Getting started

Package details

LicenseGPL (>= 2)
URL https://github.com/sprouffske/growthcurver
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
sprouffske/growthcurver documentation built on March 21, 2021, 5:38 a.m.