getGoSize: getGoSize Get GO term size (# of genes)
In ssayols/rrvgo: Reduce + Visualize GO
getGoSize R Documentation
getGoSize
Get GO term size (# of genes)
Description
getGoSize
Get GO term size (# of genes)
Usage
getGoSize(terms, orgdb, keytype, children)
Arguments
terms
GO terms
orgdb
one of org.* Bioconductor packages (the package name, or the
package itself)
keytype
keytype passed to AnnotationDbi::keys to retrieve GO terms
associated to gene ids in your orgdb
children
include genes in children terms (based on relationships in
the GO DAG hierarchy)
Value
number of genes associated with each term
ssayols/rrvgo documentation built on Nov. 6, 2024, 9:32 a.m.
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| getGoSize | R Documentation |
getGoSize Get GO term size (# of genes)
Description
getGoSize Get GO term size (# of genes)
Usage
getGoSize(terms, orgdb, keytype, children)
Arguments
terms |
GO terms |
orgdb |
one of org.* Bioconductor packages (the package name, or the package itself) |
keytype |
keytype passed to AnnotationDbi::keys to retrieve GO terms associated to gene ids in your orgdb |
children |
include genes in children terms (based on relationships in the GO DAG hierarchy) |
Value
number of genes associated with each term
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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