get.pathways: get.pathways

In staaln/pathtracer:

get.pathways

Description

Finds homo sapiens pathways in a patway database

Usage

get.pathways(pathwaydatabase = "reactome.db", id = c("symbol",
  "entrez"), min.n.genes = 10)

Arguments

pathwaydatabase	Currently only "reactome.db" is implemented
id	One of "symbol" or "entrez"
min.n.genes	Minimal number of genes in a pathway

Value

A list of pathway ids, athway descriptions, and entrez genes in each pathway

Examples

get.pathways()

staaln/pathtracer documentation built on March 17, 2022, 7:44 p.m.