stan-dev/cmdstanr
R Interface to 'CmdStan'

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Search the stan-dev/cmdstanr package
Vignettes
Functions
407
Source code
64
Man pages
69
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stan-dev/cmdstanr: R Interface to 'CmdStan'
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API

API for stan-dev/cmdstanr
R Interface to 'CmdStan'

Global functions
.absolute_path Source code
.home_path Source code
.latest_cmdstan_installed Source code
.onAttach Source code
.onLoad Source code
.remove_leftmost_dim Source code
.run_diagnose Source code
.run_generate_quantities Source code
.run_other Source code
.run_sample Source code
.wsl_check_exists Source code
CmdStanDiagnose Man page
CmdStanGQ Man page
CmdStanLaplace Man page
CmdStanMCMC Man page
CmdStanMLE Man page
CmdStanModel Man page
CmdStanPathfinder Man page
CmdStanR Man page
CmdStanVB Man page
`%||%` Source code
any_zero_dims Source code
arch_is_aarch64 Source code
as.CmdStanDiagnose Man page Source code
as.CmdStanGQ Man page Source code
as.CmdStanLaplace Man page Source code
as.CmdStanMCMC Man page Source code
as.CmdStanMLE Man page Source code
as.CmdStanPathfinder Man page Source code
as.CmdStanVB Man page Source code
as_cmdstan_fit Man page Source code
as_draws Man page
as_draws.CmdStanGQ Man page Source code
as_draws.CmdStanLaplace Man page Source code
as_draws.CmdStanMCMC Man page Source code
as_draws.CmdStanMLE Man page Source code
as_draws.CmdStanPathfinder Man page Source code
as_draws.CmdStanVB Man page Source code
as_draws_format_fun Source code
as_mcmc.list Man page Source code
assert_stan_file_exists Source code
assert_valid_draws_format Source code
assert_valid_opencl Source code
assert_valid_stanc_options Source code
assert_valid_threads Source code
available_hmc_diagnostics Source code
available_metrics Source code
build_cmdstan Source code
build_example Source code
build_status_ok Source code
check_cmdstan_toolchain Man page Source code
check_csv_metadata_matches Source code
check_dir_exists Source code
check_divergences Source code
check_ebfmi Source code
check_file_exists Source code
check_install_dir Source code
check_max_treedepth Source code
check_rtools35_windows_toolchain Source code
check_rtools4x_windows_toolchain Source code
check_sundials_fpic Source code
check_syntax Man page Source code
check_target_exe Source code
check_unix_cpp_compiler Source code
check_unix_make Source code
check_wsl_toolchain Source code
clean_cmdstan Source code
cmdstan_arch_suffix Source code
cmdstan_coercion Man page
cmdstan_default_install_path Man page Source code
cmdstan_default_path Man page Source code
cmdstan_diagnose Man page Source code
cmdstan_ext Source code
cmdstan_make_local Man page Source code
cmdstan_model Man page Source code
cmdstan_path Man page Source code
cmdstan_summary Man page Source code
cmdstan_tempdir Source code
cmdstan_version Man page Source code
cmdstanr Man page
cmdstanr-package Man page
cmdstanr_example Man page Source code
cmdstanr_global_options Man page
cmdstanr_initialize Source code
cmdstanr_knitr_env_function_generator Source code
code Man page Source code
compile Man page Source code
compile_functions Source code
compose_arg Source code
config_files Man page Source code
constrain_variables Man page Source code
convert_hmc_diagnostic_names Source code
copy_temp_files Source code
cpp_options_to_compile_flags Source code
create_draws_format Source code
create_skeleton Source code
data_file Man page Source code
diagnose Man page Source code
diagnostic_summary Man page Source code
download_with_retries Source code
draws Man page Source code
draws_to_csv Man page Source code
ebfmi Source code
eng_cmdstan Man page Source code
error_unavailable_CmdStanFit_CSV Source code
expose_functions Man page Source code
expose_model_methods Source code
expose_stan_functions Source code
fake_cmdstan_version Source code
fit-method-cmdstan_diagnose Man page
fit-method-cmdstan_summary Man page
fit-method-code Man page
fit-method-constrain_variables Man page
fit-method-data_file Man page
fit-method-diagnostic_summary Man page
fit-method-draws Man page
fit-method-expose_functions Man page
fit-method-grad_log_prob Man page
fit-method-gradients Man page
fit-method-hessian Man page
fit-method-init Man page
fit-method-init_model_methods Man page
fit-method-inv_metric Man page
fit-method-latent_dynamics_files Man page
fit-method-log_prob Man page
fit-method-loo Man page
fit-method-lp Man page
fit-method-metadata Man page
fit-method-mle Man page
fit-method-num_chains Man page
fit-method-output Man page
fit-method-output_files Man page
fit-method-print Man page
fit-method-profile_files Man page
fit-method-profiles Man page
fit-method-return_codes Man page
fit-method-sampler_diagnostics Man page
fit-method-save_config_files Man page
fit-method-save_data_file Man page
fit-method-save_latent_dynamics_files Man page
fit-method-save_metric_files Man page
fit-method-save_object Man page
fit-method-save_output_files Man page
fit-method-save_profile_files Man page
fit-method-summary Man page
fit-method-time Man page
fit-method-unconstrain_draws Man page
fit-method-unconstrain_variables Man page
fit-method-variable_skeleton Man page
format Man page Source code
generate_file_names Source code
generate_quantities Man page Source code
get_cmdstan_flags Source code
get_function_name Source code
get_plain_rtn Source code
get_standalone_hpp Source code
github_auth_token Source code
github_download_url Source code
grad_log_prob Man page Source code
gradients Man page Source code
hessian Man page Source code
include_paths_stanc3_args Source code
init Man page Source code
init_model_methods Man page Source code
initialize_model_pointer Source code
install_cmdstan Man page Source code
install_toolchain Source code
inv_metric Man page Source code
is_release_candidate Source code
is_rosetta2 Source code
is_rtools40_toolchain Source code
is_rtools42_toolchain Source code
is_rtools43_toolchain Source code
is_toolchain_installed Source code
is_ucrt_toolchain Source code
is_variables_method_supported Source code
is_verbose_mode Source code
is_wholenumber Source code
laplace Man page Source code
latent_dynamics_files Man page Source code
latest_released_version Source code
list_to_array Source code
log_prob Man page Source code
loo Man page Source code
lp Man page Source code
lp_approx Man page Source code Source code
lp_diagnose Source code
make_cmd Source code
matching_variables Source code
maybe_convert_draws_format Source code
maybe_generate_seed Source code
maybe_recycle_init Source code
maybe_recycle_metric_file Source code
metadata Man page Source code
metric_files Man page Source code
mle Man page Source code
model-method-check_syntax Man page
model-method-compile Man page
model-method-diagnose Man page
model-method-expose_functions Man page
model-method-format Man page
model-method-generate-quantities Man page
model-method-laplace Man page
model-method-optimize Man page
model-method-pathfinder Man page
model-method-sample Man page
model-method-sample_mpi Man page
model-method-variables Man page
model-method-variational Man page
model_compile_info Source code
model_variables Source code
num_chains Man page Source code
num_threads Man page Source code
optimize Man page Source code
os_is_linux Source code
os_is_macos Source code
os_is_windows Source code
os_is_wsl Source code
output Man page Source code
output_files Man page Source code
pathfinder Man page Source code
prep_fun_cpp Source code
print.CmdStanMCMC Man page
print.CmdStanMLE Man page
print.CmdStanVB Man page
print_example_program Man page Source code
process_data Source code
process_fitted_params Source code
process_init Source code
process_init.CmdStanLaplace Source code
process_init.CmdStanMCMC Source code
process_init.CmdStanMLE Source code
process_init.CmdStanPathfinder Source code
process_init.CmdStanVB Source code
process_init.default Source code
process_init.draws Source code
process_init.function Source code
process_init.list Source code
process_init_approx Source code
profile_files Man page Source code
profiles Man page Source code
rcpp_source_stan Source code
read_cmdstan_csv Man page Source code
read_cmdstan_version Source code
read_csv_metadata Source code
read_sample_csv Man page Source code
rebuild_cmdstan Man page Source code
register_knitr_engine Man page Source code
remaining_columns_to_read Source code
repair_path Source code
repair_variable_names Source code
require_suggested_package Source code
reset_cmdstan_version Source code
return_codes Man page Source code
rtools4x_home_path Source code
rtools4x_toolchain_path Source code
rtools4x_version Source code
rtools_home_path Source code
sample Man page Source code
sample_mpi Man page Source code
sampler_diagnostics Man page Source code
save_config_files Man page Source code
save_data_file Man page Source code
save_latent_dynamics_files Man page Source code
save_metric_files Man page Source code
save_object Man page Source code
save_output_files Man page Source code
save_profile_files Man page Source code
set_cmdstan_path Man page Source code
set_num_threads Man page Source code
short_path Source code
stan_threads Man page
stanc_cmd Source code
startup_messages Source code
stop_no_path Source code
strip_ext Source code
summary Man page Source code
tbb_path Source code
time Man page Source code
toolchain_PATH_env_var Source code
try_download Source code
unconstrain_draws Man page Source code
unconstrain_variables Man page Source code
unrepair_variable_names Source code
unset_cmdstan_path Source code
valid_draws_formats Source code
validate_cmdstan_args Source code
validate_diagnose_args Source code
validate_exe_file Source code
validate_fit_init Source code
validate_generate_quantities_args Source code
validate_init Source code
validate_laplace_args Source code
validate_metric Source code
validate_metric_file Source code
validate_optimize_args Source code
validate_pathfinder_args Source code
validate_sample_args Source code
validate_seed Source code
validate_variational_args Source code
variable_dims Source code
variable_skeleton Man page Source code
variables Man page Source code
variational Man page Source code
write_stan_file Man page Source code
write_stan_json Man page Source code
write_stan_tempfile Man page Source code
wsl_compatible_process_new Source code
wsl_compatible_run Source code
wsl_dir_prefix Source code
wsl_distro_name Source code
wsl_home_dir Source code
wsl_installed Source code
wsl_safe_path Source code
wsl_tempdir Source code
stan-dev/cmdstanr documentation built on April 12, 2025, 8:40 p.m.

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