ModSwissXT: Swiss-Prot X!Tandem data
In statOmics/TargetDecoy: Diagnostic Plots to Evaluate the Target Decoy Approach
ModSwissXT R Documentation
Swiss-Prot X!Tandem data
Description
Data from a Pyrococcus furiosis sample run on a LTQ-Orbitrap Velos mass spectrometer.
The data can be found in the PRIDE repository with identifier PXD001077.
The Pyrococcus furiosis reference proteome fasta files were downloaded from
UniProtKB/Swiss-Prot on April 22, 2016.
The Pyrococcus data was searched against all Pyrococcus proteins
with a combined search (omssa, X!Tandem and MS-GF+) using the reference proteome
from UniProtKB/Swiss-Prot.
Usage
data(ModSwissXT)
Format
An mzID object.
statOmics/TargetDecoy documentation built on Nov. 9, 2022, 9:30 a.m.
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| ModSwissXT | R Documentation |
Swiss-Prot X!Tandem data
Description
Data from a Pyrococcus furiosis sample run on a LTQ-Orbitrap Velos mass spectrometer. The data can be found in the PRIDE repository with identifier PXD001077. The Pyrococcus furiosis reference proteome fasta files were downloaded from UniProtKB/Swiss-Prot on April 22, 2016. The Pyrococcus data was searched against all Pyrococcus proteins with a combined search (omssa, X!Tandem and MS-GF+) using the reference proteome from UniProtKB/Swiss-Prot.
Usage
data(ModSwissXT)
Format
An mzID object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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