statModelAccessors: Accessor functions for StatModel class

In statOmics/satuRn: Scalable Analysis of Differential Transcript Usage for Bulk and Single-Cell RNA-sequencing Applications

Accessor functions for StatModel class

Description

Accessor functions for StatModel class

getModel(object)

to get model

getDF(object)

to get the residual degrees of freedom of the model

getDfPosterior(object)

to get the degrees of freedom of the empirical Bayes variance estimator

getDispersion(object)

to get the dispersion estimate of the model

getCoef(object)

to get the parameter estimates of the mean model

Usage

## S4 method for signature 'StatModel'
getModel(object)

## S4 method for signature 'StatModel'
getDF(object)

## S4 method for signature 'StatModel'
getDfPosterior(object)

## S4 method for signature 'StatModel'
getDispersion(object)

## S4 method for signature 'StatModel'
getCoef(object)

Arguments

object

StatModel object

Value

The requested parameter of the StatModel object

Examples

## A fully specified dummy model
myModel <- StatModel(
    type = "glm",
    params = list(x = 3, y = 7, b = 4),
    varPosterior = c(0.1, 0.2, 0.3),
    dfPosterior = c(6, 7, 8)
)
getModel(myModel)

statOmics/satuRn documentation built on March 9, 2023, 3:43 p.m.