| ahtsummary | ahtsummary |
| annotatePDFs | annotatePDFs |
| AverageReplicates | AverageReplicates |
| aveytoolkit | aveytoolkit. |
| barplotCI | barplotCI |
| cbind.fill | resetPar |
| collapseDataset | collapseDataset |
| Diverge0 | Diverge0 |
| fishersMethod | fishersMethod |
| FoldChange | FoldChange |
| geomMean | geomMean |
| getBaseTheme | getBaseTheme |
| get_bioc | get_bioc |
| GetEqn | GetEqn |
| getLoginDetails | getLoginDetails |
| ggDualAxis | ggplot dual axis |
| ggSmartBoxplot | ggSmartBoxplot |
| ggSmoothExprPlot | ggSmoothExprPlot |
| INT | INT |
| lsos | lsos |
| MakeDF | MakeDF |
| makeTransparent | makeTransparent |
| Multiplot | Multiplot |
| Pause | Pause |
| PlotTimeCourse | PlotTimeCourse |
| plus-.uneval | Addition for 'aes()' and 'aes_string()' |
| PrepareExpression | PrepareExpression |
| ProcessNames | ProcessNames |
| readGMT | readGMT.R |
| RepeatBefore | RepeatBefore |
| resetPar | resetPar |
| sigHeatmap | sigHeatmap |
| writeGMT | aveytoolkit_writeGMT.R |
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