knitr::opts_chunk$set(echo = TRUE)
This submission
devtools::check(env_vars = c('_R_CHECK_DEPENDS_ONLY_' = "true"))
to mimmick CRAN incoming checks\donttest
changed in \dontrun
to evade _R_CHECK_DEPENDS_ONLY_=true
errors;mice 3.16.0
after the orphaned ucminf
CRAN package got a new maintainer;_R_CHECK_DEPENDS_ONLY_=true
flag, as requested;https://cran.r-project.org/web/checks/check_results_mice.html
;NEWS.md
.R.Version()
devtools::check_win_devel() Status: OK
devtools::check_rhub()
── mice 3.16.0: NOTE Build ID: mice_3.16.0.tar.gz-018f40fa4cdc492d8c9f43b7e5f5e0e7 Platform: Windows Server 2022, R-devel, 64 bit Submitted: 11m 27s ago Build time: 11m 25s ❯ checking HTML version of manual ... [27s] NOTE Skipping checking math rendering: package 'V8' unavailable ❯ checking for non-standard things in the check directory ... NOTE Found the following files/directories: ''NULL'' ❯ checking for detritus in the temp directory ... NOTE Found the following files/directories: 'lastMiKTeXException' 0 errors ✔ | 0 warnings ✔ | 3 notes ✖
I believe these NOTES are benign.
Status: succes
Status: succes
FAILURE Running `R CMD build`... * checking for file ‘/tmp/Rtmp5Lhzhn/remotes13171d81356/mice/DESCRIPTION’ ... OK * preparing ‘mice’: * checking DESCRIPTION meta-information ... OK * cleaning src * checking for LF line-endings in source and make files and shell scripts * checking for empty or unneeded directories * building ‘mice_3.16.0.tar.gz’ Installing package into ‘/home/docker/R’ (as ‘lib’ is unspecified) Error : Bioconductor does not yet build and check packages for R version 4.4; see https://bioconductor.org/install ERROR: dependency ‘mitml’ is not available for package ‘mice’ * removing ‘/home/docker/R/mice’ > There were 20 warnings (use warnings() to see them) > Error : Bioconductor does not yet build and check packages for R version 4.4; see https://bioconductor.org/install > library(mice) Error in library(mice) : there is no package called ‘mice’ Execution halted Build step 'Execute shell' marked build as failure Pinging https://builder.r-hub.io/build/FAILURE/mice_3.16.0.tar.gz-82dc7cda08814b25ac48be4b5c9c940b/2023-06-01T11:37:52Z {"status":"ok"} Finished: FAILURE
I believe I cannot do something to make this problem disappear.
Package built by
library("devtools") build()
```{bash eval=FALSE} R CMD CHECK mice_3.16.0.tar.gz
Status: OK
### Local check using `_R_CHECK_DEPENDS_ONLY_=true` flag. NOTE: Run in OSX terminal, not in Rstudio terminal. ```{bash eval=FALSE} env _R_CHECK_DEPENDS_ONLY_=true R CMD check mice_3.16.0.tar.gz Status: OK
devtools::check(env_vars = c('_R_CHECK_DEPENDS_ONLY_' = "true")) ... Status: OK ── R CMD check results ─────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────── mice 3.16.0 ──── Duration: 1m 13s 0 errors ✔ | 0 warnings ✔ | 0 notes ✔
mice
has 114 downstream dependencies
# NOTE: Temporarily remove credentials line from .Rprofile library(revdepcheck) revdep_reset() revdep_check(pkg = ".", num_workers = 10, quiet = FALSE)
revdepcheck::revdep_summary()
MatchThem
There is one new warning, for the MatchThem
package:
revdepcheck::revdep_details(revdep = "MatchThem")
MatchThem
package that the
documentation for cbind.mids()
was removed from the mice
package
to conform to CRAN guidelines. The maintainer responded this will be fixed
in the next release.bipd
revdepcheck::revdep_details(revdep = "bipd")
bipd
is equivalent to the old one. I contacted the maintainer previously. Did not repeat it now.pre
test_pre_misc.R
of the pre
package (mice
is on pre
Suggests):revdepcheck::revdep_details(revdep = "pre")
pre
maintainer by means of
issue https://github.com/marjoleinF/pre/issues/30.Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.