Description Usage Arguments Value
normalize the expression data (sample wise)
normalize the expression data by subsampling as described in PMID 24531970
1 2 3 |
reads |
the required read depth |
name |
the name of the new object |
x |
The NGSexpressionSet |
readCounts |
The number of reads from each bam file or another value you want to normalize the data to |
to_gene_length |
FALSE whether or not to normalize the data to gene length |
geneLengthCol |
the column in the annotation data.frame to (in addition) normalize the genes to (e.g. trancript length) |
x |
The SingleCellsNGS object |
the normalized data set (original data stored in NGS$raw
the normalized data set (original data stored in slot 'raw'
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.